All functions

combine_cpdb()

combine multiple results from cellphonedb.

correlationSpot()

Plotting correlations on Vissium data in Seurat

geneDotPlot()

Plotting genes as dotplot

kidneyimmune cpdb_output pvals decon sig_means pvals2 decon2 sig_means2 covid_cpdb_meta covid_sample_metadata cpdb_output_v5 sce_v5 relevant_interactions_v5 decon_v5 cellsign_v5 interaction_scores_v5

kidneyimmune

init_ktplots() ktplots()

documenting ktplots shortcut

range01() `%nin%` small_legend() small_guide() small_axis() small_grid() topright_legend() topleft_legend() bottomleft_legend() bottomright_legend()

miscellaneous functions

plot_cpdb()

Plotting CellPhoneDB results

plot_cpdb2()

Plotting CellPhoneDB results

plot_cpdb3()

Plotting CellPhoneDB results as a chord diagram

plot_cpdb4()

Plotting select interactions from CellPhoneDB results as a chord diagram

plot_cpdb_heatmap()

Plotting CellPhoneDB results as a heatmap